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USC-OGP 2-DE database

Two-dimensional polyacrylamide gel electrophoresis database


USC-OGP 2-DE database 
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Searching in 'USC-OGP 2-DE database' for entry matching: P62633




USC-OGP 2-DE database:  P62633


P62633


General information about the entry
View entry in simple text format
Entry nameCNBP_HUMAN
Primary accession numberP62633
integrated into USC-OGP 2-DE database on January 17, 2017 (release 1)
2D Annotations were last modified onJanuary 17, 2017 (version 1)
General Annotations were last modified on April 5, 2017 (version 2)
Name and origin of the protein
DescriptionRecName: Full=Cellular nucleic acid-binding protein; Short=CNBP; AltName: Full=Zinc finger protein 9;.
Gene nameName=CNBP
Synonyms=RNF163, ZNF9
Annotated speciesHomo sapiens (Human) [TaxID: 9606]
TaxonomyEukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.
References
[1]   2D GEL CHARACTERIZATION
Author 1., Author 2.
Submitted (Mar-2011) to Current
2D PAGE maps for identified proteins
How to interpret a protein

UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10}
Homo sapiens (Human)
UVEAL_MELANOMA_3-10
  map experimental info
 
UVEAL_MELANOMA_3-10

MAP LOCATIONS:
pI=8.32; Mw=19569

Cross-references
UniProtKB/Swiss-ProtP62633; CNBP_HUMAN.



2D PAGE maps for identified proteins
  • How to interpret a protein map
  • You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw.
  • Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly.
  • Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed.



External data extracted from UniProtKB/Swiss-Prot
Extracted from UniProtKB/Swiss-Prot, release: 0.0
Entry nameCNBP_HUMAN
Primary accession numberP62633
Secondary accession number(s) A8K7V4 B2RAV9 B4DP17 D3DNB9 D3DNC0 D3DNC1 E9PDR7 P20694 Q4JGY0 Q4JGY1 Q5QJR0 Q5U0E9 Q6PJI7 Q96NV3
Sequence was last modified on July 19, 2004 (version 1)
Annotations were last modified on March 15, 2017 (version 134)
Name and origin of the protein
DescriptionRecName: Full=Cellular nucleic acid-binding protein; Short=CNBP; AltName: Full=Zinc finger protein 9;
Gene nameName=CNBP
Synonyms=RNF163, ZNF9
Encoded onName=CNBP; Synonyms=RNF163, ZNF9
KeywordsAcetylation; Alternative splicing; Complete proteome; Cytoplasm; DNA-binding; Endoplasmic reticulum; Metal-binding; Methylation; Phosphoprotein; Reference proteome; Repeat; Repressor; Transcription; Transcription regulation; Zinc; Zinc-finger.
Copyright
Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License
Cross-references
EMBLM28372; AAA61975.1; -; mRNA
EMBLU19765; AAA91782.1; -; Genomic_DNA
EMBLAY329622; AAR89462.1; -; Genomic_DNA
EMBLDQ092366; AAY96754.1; -; mRNA
EMBLDQ092367; AAY96755.1; -; mRNA
EMBLDQ091187; AAY89856.1; -; mRNA
EMBLAK054592; BAB70769.1; -; mRNA
EMBLAK298154; BAG60429.1; -; mRNA
EMBLAK292119; BAF84808.1; -; mRNA
EMBLAK314380; BAG37006.1; -; mRNA
EMBLBT019613; AAV38419.1; -; mRNA
EMBLAC108673; -; NOT_ANNOTATED_CDS; Genomic_DNA
EMBLAC135587; -; NOT_ANNOTATED_CDS; Genomic_DNA
EMBLCH471052; EAW79271.1; -; Genomic_DNA
EMBLCH471052; EAW79272.1; -; Genomic_DNA
EMBLCH471052; EAW79273.1; -; Genomic_DNA
EMBLCH471052; EAW79274.1; -; Genomic_DNA
EMBLCH471052; EAW79275.1; -; Genomic_DNA
EMBLCH471052; EAW79277.1; -; Genomic_DNA
EMBLBC000288; AAH00288.1; -; mRNA
EMBLBC014911; AAH14911.1; -; mRNA
EMBLBC093058; AAH93058.1; -; mRNA
CCDSCCDS3056.1; -. [P62633-1]; .
CCDSCCDS46906.1; -. [P62633-6]; .
CCDSCCDS46907.1; -. [P62633-4]; .
CCDSCCDS46908.1; -. [P62633-5]; .
CCDSCCDS54637.1; -. [P62633-2]; .
PIRA32760; A32760; .
RefSeqNP_001120664.1; NM_001127192.1. [P62633-6]; .
RefSeqNP_001120665.1; NM_001127193.1. [P62633-4]; .
RefSeqNP_001120666.1; NM_001127194.1. [P62633-5]; .
RefSeqNP_001120667.1; NM_001127195.1. [P62633-8]; .
RefSeqNP_001120668.1; NM_001127196.1. [P62633-2]; .
RefSeqNP_003409.1; NM_003418.4. [P62633-1]; .
UniGeneHs.518249; -; .
ProteinModelPortalP62633; -; .
SMRP62633; -; .
BioGrid113387; 139; .
IntActP62633; 11; .
MINTMINT-4589059; -; .
STRING9606.ENSP00000410769; -; .
iPTMnetP62633; -; .
PhosphoSitePlusP62633; -; .
SwissPalmP62633; -; .
BioMutaCNBP; -; .
DMDM50401852; -; .
EPDP62633; -; .
MaxQBP62633; -; .
PaxDbP62633; -; .
PeptideAtlasP62633; -; .
PRIDEP62633; -; .
DNASU7555; -; .
EnsemblENST00000422453; ENSP00000410619; ENSG00000169714. [P62633-1]; .
EnsemblENST00000441626; ENSP00000410769; ENSG00000169714. [P62633-6]; .
EnsemblENST00000446936; ENSP00000400444; ENSG00000169714. [P62633-5]; .
EnsemblENST00000451728; ENSP00000399488; ENSG00000169714. [P62633-4]; .
EnsemblENST00000500450; ENSP00000426223; ENSG00000169714. [P62633-7]; .
EnsemblENST00000502976; ENSP00000421323; ENSG00000169714. [P62633-2]; .
EnsemblENST00000504813; ENSP00000422110; ENSG00000169714. [P62633-3]; .
GeneID7555; -; .
KEGGhsa:7555; -; .
UCSCuc003elq.5; human. [P62633-1]; .
CTD7555; -; .
DisGeNET7555; -; .
GeneCardsCNBP; -; .
GeneReviewsCNBP; -; .
HGNCHGNC:13164; CNBP; .
HPAHPA063097; -; .
MalaCardsCNBP; -; .
MIM116955; gene; .
MIM602668; phenotype; .
neXtProtNX_P62633; -; .
OpenTargetsENSG00000169714; -; .
Orphanet606; Proximal myotonic myopathy; .
PharmGKBPA37737; -; .
eggNOGKOG4400; Eukaryota; .
eggNOGCOG5082; LUCA; .
GeneTreeENSGT00510000047065; -; .
HOGENOMHOG000186262; -; .
HOVERGENHBG000397; -; .
InParanoidP62633; -; .
KOK09250; -; .
OMASRECDQD; -; .
OrthoDBEOG091G0LZK; -; .
PhylomeDBP62633; -; .
TreeFamTF316974; -; .
SIGNORP62633; -; .
ChiTaRSCNBP; human; .
GeneWikiCNBP; -; .
GenomeRNAi7555; -; .
PROPR:P62633; -; .
ProteomesUP000005640; Chromosome 3; .
BgeeENSG00000169714; -; .
CleanExHS_CNBP; -; .
ExpressionAtlasP62633; baseline and differential; .
GenevisibleP62633; HS; .
GOGO:0005829; C:cytosol; ISS:UniProtKB; .
GOGO:0005783; C:endoplasmic reticulum; ISS:UniProtKB; .
GOGO:0005634; C:nucleus; ISS:UniProtKB; .
GOGO:0003723; F:RNA binding; IDA:UniProtKB; .
GOGO:0000977; F:RNA polymerase II regulatory region sequence-specific DNA binding; IDA:NTNU_SB; .
GOGO:0003697; F:single-stranded DNA binding; IEA:Ensembl; .
GOGO:0003727; F:single-stranded RNA binding; IEA:Ensembl; .
GOGO:0003700; F:transcription factor activity; sequence-specific DNA binding; TAS:ProtInc
GOGO:0001227; F:transcriptional repressor activity; RNA polymerase II transcription regulatory region sequence-specific binding; IDA:NTNU_SB
GOGO:0008270; F:zinc ion binding; IEA:InterPro; .
GOGO:0006695; P:cholesterol biosynthetic process; TAS:ProtInc; .
GOGO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:NTNU_SB; .
GOGO:0008284; P:positive regulation of cell proliferation; ISS:UniProtKB; .
GOGO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB; .
GOGO:0045893; P:positive regulation of transcription; DNA-templated; ISS:UniProtKB
GOGO:0006355; P:regulation of transcription; DNA-templated; TAS:ProtInc
GOGO:0006351; P:transcription; DNA-templated; IEA:UniProtKB-KW
Gene3D4.10.60.10; -; 4; .
InterProIPR001878; Znf_CCHC; .
PfamPF00098; zf-CCHC; 7; .
SMARTSM00343; ZnF_C2HC; 7; .
SUPFAMSSF57756; SSF57756; 4; .
PROSITEPS50158; ZF_CCHC; 7; .



USC-OGP 2-DE database image


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Database constructed and maintained by Angel Garcia, using the Make2D-DB II package (ver. 3.10.2) from the World-2DPAGE Constellation of the ExPASy web server

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